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ISB Nomenclature

ISB Glossary

Search for glossary terms (regular expression allowed)

Glossaries

Term Main definition
Batch Homology Search

Function of collecting homology search by using many features as a query. Implemented on IMCGE or higher edition of IMC.

Hits - 1039
Synonyms - Auto Homology Search,Homology Search by Selected Feature
Batch Primer Design

Design the Primer Set for collecting a large number of regions collectively. Implemented in IMC.

Hits - 1161
Synonyms - Batch PCR Primer Design
Binary Best Hit

Even if you replace Query and Subject by homology search etc., the relationship that becomes the best score in the list of hit Subjects.

Hits - 9965
Synonyms - BBH
BPMAP

Affymetrix's array file format. Includes probe position information on the genome. It is used with IMCAE or higher.

Hits - 639
Category

Used to classify features freely. The default usage is mainly to classify annotation stages.

Hits - 1185
Synonyms - annotation_grade
CDS

A coding region of genomic sequence.

Hits - 1546
Synonyms - Coding Region
Circular Genome Map

Function to create a circular genome map. Customize the map and save the design as a style. Implemented IMCGE or higher edition of IMC.

Hits - 6
Classification

It is used for color classification of Qualifier, feature set by IMC independently.

Hits - 1121
Synonyms - classification
Close

An operation button for closing the setting dialog without applying the setting.

Hits - 1078
Codon

Refers to a set of three consecutive nucleic acids translated into one amino acid.

Hits - 1289
Synonyms - codon
Core Genome Analysis

Extract core genome from bread genome

Hits - 180
Current Genome Sequence

The genomic base sequence loaded in the current main directory. Can perform editing operations such as annotation.

Hits - 1306
Synonyms - Current Genomic Sequence
CygWin

It is a Linux enumulator on Windows. It is used when launching Linux software with IMC, etc.

Hits - 741
Synonyms - Cygwin
Delimiter

Character separating fields

Hits - 771
Description Pane

A pane that displays and edits the contents of features in annotation windows and description windows.

Hits - 1043
Synonyms - description pane