ゲノム解析ソフトウェア技術情報サイト

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ISB Nomenclature

ISB Glossary

Search for glossary terms (regular expression allowed)

Glossaries

Term Main definition
dialog

Interactive operation window

Hits - 34
Synonyms - Dialog
DotPlot

Homologous regions between two genomes are shown by the presence or absence of dots by the sliding window method.

Synonyms - dot plot
E-Value

Expected value of the number of sequences that coincidentally coincide when searching a random sequence database of the same size in the query sequence.

Hits - 721
Synonyms - e-value,E-value
EC Number

A classification of enzymes represented by four pairs of numbers.

Hits - 811
Synonyms - EC number, EC_Number
FastA

Nucleotide sequence or amino acid sequence format. It consists of definition rows and sequence rows.

Hits - 808
Synonyms - fasta
Feature Key

Type of feature

Hits - 844
Synonyms - FK
Feature Lane

A part of the main feature map.

Hits - 108
Synonyms - feature lane
Feature Map

A biological feature (feature) annotated on the genome sequence is displayed on a map like meaningful shape and color according to its position.

Hits - 856
Synonyms - feature map
Gene Cluster Alignment

The function of focusing on one gene among multiple genomes and displaying the alignment of the entire neighborhood including that gene. Implemented on IMCGE or higher edition. To Category.

Hits - 6
genetic code table

A conversion table which convert a codon to corresponding amino acid code.

Hits - 822
Synonyms - genetic table
Genome Traveler

NGS analysis software developed by in silico biology, inc.

Hits - 793
Synonyms - GT
IMC

Genome analysis software developed and sold by in silico biology, inc.

Hits - 1473
Synonyms - in silico MolecularCloning
Keyword Search

Searches for keywords that exist in the annotation. Nucleotide sequences and amino acid sequences are not covered. AND OR NOT operation is possible.

Separate each keyword with a space character. You can set options that are not case sensitive.

Hits - 608
Lane Type

Kind of lane.

Hits - 570
Synonyms - lane type
LGRM

Ability to examine two different strains of related microbial strains over the entire genome and check their differences in base units and display them on feature lanes and sequence lanes

Hits - 416
Synonyms - Local Genome Rearrangement Map,LGR Map