Genome Analysis Software Site

in silico biology, inc.

IMC W726 FastA Setting Tab Pane Description

In the FastA tab pane, you can edit the header of the sequence that is output as a file in FastA format.

The FastA format is a simple sequence format consisting of definition rows and sequence rows, but by using Delimiter in the description of the definition line, many attributes can be stuffed into the definition line 1 line.

In this tab pane, you set up how to generate the definition line of FastA.

FastA Definition Line Setting section

In the list on the left, undefined definition line description items are listed.

In the list on the right, the set definition line description items are listed.

The default set description items are as follows.

Feature Key: Feature key of the feature from which the sequence output by FastA is derived

Start: Starting base position on the genomic sequence of the feature from which the sequence outputted by FastA is derived

End: End base position on the genomic sequence of the feature from which the sequence outputted by Fast A is derived

Strand: Strand describing the feature from which the array from which Fast A is derived

Upstream Gene: The closest gene name on the upstream side of the feature from which the sequence output by FastA is derived

Downstream Gene: The closest gene name on the downstream side of the feature from which the sequence output by FastA is derived

Add -> button: Adds the selected item on the list on the left to the list on the right.

<- Del button: Returns the selected item on the list on the right to the list on the left.

Delimiter text field: Specify the character to be used as Delimiter (delimiter).

Definition text field: Indicates the design result of the definition line.

For Feature Setting common operation buttons, please click here.

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