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Function Overviews and Basic Operation GT Primer GT 11D Practice Fragment Mapping using Training Data
Function Overviews and Basic Operation GT Primer GT 11D Practice Fragment Mapping using Training DataGenome Analysis Software Info Site
Official Technology Information Site of in silico biology, inc.
Function Menu
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Function Overviews and Basic Operation
Work Bench
Feature Map- Feature Key and Feature
Management and Operations of Feature Keys- Attributes of Feature Keys
- IMC Original Set Feature Keys
- Types and Roles of Qualifiers
- IMC Original Set Qualifiers
- View and Edit Qualifiers
- Feature Position on Genome Sequence
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Sequence and Data Input and Output- Genome / Sequence Viewer / Editor
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Sequence Viewer
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Search Sequence and Annotation- Cloning
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GT 11D Practice Fragment Mapping using Training Data
Practice the fragment mapping operation using training data.
Operation
Start GT.
Right click mouse over "last_mapping" node.
The menu will be displayed.
Select "New Analysis Node -> Fragment Mapping".
The Fragment Mapping dialog will be displayed.
Click Add ... and select a file naeded *demo.fasta from the demo data (training data).
Check all check boxes.
Click Run.
An execution confirmation message is displayed.
Click "Yes (Y)".
Execution is started and a progress message is displayed during execution.
When the mapping process is complete, a completion message is displayed.
Click "OK".
The node of this mapping result is created at the top of Analysis node of last_mapping node.
Right-click on the node and select Expand from the displayed menu, or double-click the node.
The bam file node is displayed below the node.
Right-click on the bam file node on the mouse.
The menu will be displayed.
Select "Show Read Alignment".
The Alignment Viewer for viewing and analyzing the mapping result is displayed.
