Genome Analysis Software Site

in silico biology, inc.

IMC W553 Venn Diagram 2 Genome Common and Unique Gene List Tab Pane

Three genomic common and unique gene lists are created and can be opened by clicking on each tab.

  • 2 Genome-wide common gene list (Bi-Directional Hit in the screen below) (Number of genes)
  • In genome 1, unique gene list for genome 2 (No Hit NC - 002179) (number of genes)

  • No.: Sequence number of common or unique genes counted from the upper stream on genome 1

Genome 1

  • gene: gene name annotated in gene on genome 1
  • locus_tag: locus_tag annotated for that gene
  • protein_id: Example. You can freely select this display item from the Qualifier list
  • Start: Starting position of genes on genome 1 belonging to this common gene
  • End: end position of the gene on genome 1 belonging to this common gene
  • Strand: Strand carrying genes on genome 1 belonging to this common gene
  • Identity: degree of amino acid residue matching between genes of genome 1 and genome 2

Genome 2

  • gene: gene name annotated in gene on genome 2
  • locus_tag: locus_tag annotated to the gene on genome 2
  • protein_id: Example. You can freely select this display item from the Qualifier list
  • Start: Starting position of genes on genome 2 belonging to this common gene
  • End: End position of genes on genome 2 belonging to this common gene
  • Strand: Strand carrying genes on genome 2 belonging to this common gene

Operation button

  • CSV ... button: Outputs the list in CSV format
  • Save ... button: Save the file in a state that all analysis results can be reloaded
  • Close ... button: Closes the dialog. Analysis results are not saved

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