Genome Analysis Software Info Site

• CDS candidates can be registered as new features from the stop lane stop absence region of the frame lane.
• This is not a CDS prediction function. The GT-AG rule is ignored.

Operation

1. We display the feature lane and frame lane in the main feature map.
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3. Right-click on the stop lane stop codon absent area (orange area in the above figure) in the frame lane.
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5. The description window will be displayed.
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7. Click "Apply".
8. The CDS corresponding to the selected area is newly registered.
9. If CDS display is set in the feature lane, it will be displayed as follows.
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11. Register CDS candidates consisting of multiple exons in eukaryotic organisms.
12. Display the frame lane in the main feature map.
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14. Click from the first exon candidate to the region immediately before the last exon.
15. If you click the last exon candidate before right-clicking the mouse, it will be out of the selection.
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17. Right click on the final exon candidate.
18. A menu will be displayed and click on "Save as a (new) Feature".
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20. The description window will be displayed.
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22. Position information of the number of areas specified for Location is set.
23. Click "Apply".
24. A multi-exon CDS will be displayed on the feature lane.
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26. It is also possible to draw for each frame to which each exon belongs.
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